Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Chmp4bQ9D8B3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC21.02■□□□□ 0.96
Chmp4bQ9D8B3 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4bQ9D8B3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4bQ9D8B3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chmp4bQ9D8B3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chmp4bQ9D8B3 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chmp4bQ9D8B3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC21.02■□□□□ 0.95
Chmp4bQ9D8B3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chmp4bQ9D8B3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chmp4bQ9D8B3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chmp4bQ9D8B3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Chmp4bQ9D8B3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Gm13186-201ENSMUST00000118031 316 ntBASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chmp4bQ9D8B3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 AC159205.6-201ENSMUST00000224935 887 ntBASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21■□□□□ 0.95
Chmp4bQ9D8B3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Gm13436-201ENSMUST00000120418 567 ntBASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Gm7370-201ENSMUST00000219471 767 ntBASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Gm18115-201ENSMUST00000221209 621 ntBASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.99■□□□□ 0.95
Chmp4bQ9D8B3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chmp4bQ9D8B3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Gm13559-201ENSMUST00000120476 863 ntBASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chmp4bQ9D8B3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Chmp4bQ9D8B3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms