Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chmp4cQ9D7F7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Haglr-201ENSMUST00000100000 2085 ntBASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp4cQ9D7F7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp4cQ9D7F7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp4cQ9D7F7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp4cQ9D7F7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms