Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rpap3Q9D706 AC124569.2-201ENSMUST00000225998 818 ntBASIC18.41■□□□□ 0.54
Rpap3Q9D706 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rpap3Q9D706 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rpap3Q9D706 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Gm10052-201ENSMUST00000168019 960 ntBASIC18.4■□□□□ 0.54
Rpap3Q9D706 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.4■□□□□ 0.54
Rpap3Q9D706 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Gm7729-201ENSMUST00000050143 801 ntBASIC18.4■□□□□ 0.54
Rpap3Q9D706 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.4■□□□□ 0.54
Rpap3Q9D706 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.4■□□□□ 0.54
Rpap3Q9D706 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.4■□□□□ 0.54
Rpap3Q9D706 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap3Q9D706 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpap3Q9D706 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Rpap3Q9D706 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rpap3Q9D706 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Rpap3Q9D706 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap3Q9D706 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.39■□□□□ 0.53
Rpap3Q9D706 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.39■□□□□ 0.53
Rpap3Q9D706 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.38■□□□□ 0.53
Rpap3Q9D706 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap3Q9D706 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Gm44430-201ENSMUST00000203376 995 ntBASIC18.37■□□□□ 0.53
Rpap3Q9D706 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap3Q9D706 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Gm12895-201ENSMUST00000122214 226 ntBASIC18.36■□□□□ 0.53
Rpap3Q9D706 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap3Q9D706 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms