Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx29Q9D3S3 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44357-201ENSMUST00000195897 142 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm19658-201ENSMUST00000196231 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44367-201ENSMUST00000196836 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44350-201ENSMUST00000197197 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44390-201ENSMUST00000197533 144 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44313-201ENSMUST00000198018 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44486-201ENSMUST00000198508 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44314-201ENSMUST00000199263 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44394-201ENSMUST00000199558 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44484-201ENSMUST00000199873 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44466-201ENSMUST00000200264 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Gm44359-201ENSMUST00000200671 138 ntBASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx29Q9D3S3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Gm18206-201ENSMUST00000207027 926 ntBASIC18.3■□□□□ 0.52
Snx29Q9D3S3 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.3■□□□□ 0.52
Snx29Q9D3S3 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx29Q9D3S3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx29Q9D3S3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Snx29Q9D3S3 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.28■□□□□ 0.52
Snx29Q9D3S3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx29Q9D3S3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx29Q9D3S3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx29Q9D3S3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC18.28■□□□□ 0.52
Snx29Q9D3S3 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Snx29Q9D3S3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Snx29Q9D3S3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Snx29Q9D3S3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx29Q9D3S3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx29Q9D3S3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Snx29Q9D3S3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Snx29Q9D3S3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms