Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Gm7370-201ENSMUST00000219471 767 ntBASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
5530400C23RikQ9D3I0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
5530400C23RikQ9D3I0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Gm16061-201ENSMUST00000122167 857 ntBASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Gm13474-201ENSMUST00000122466 815 ntBASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
5530400C23RikQ9D3I0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
5530400C23RikQ9D3I0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
5530400C23RikQ9D3I0 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Mir5130-201ENSMUST00000175160 84 ntBASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Gm18959-201ENSMUST00000208954 655 ntBASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
5530400C23RikQ9D3I0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms