Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nip7Q9CXK8 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Nip7Q9CXK8 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nip7Q9CXK8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nip7Q9CXK8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nip7Q9CXK8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nip7Q9CXK8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nip7Q9CXK8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Gm8969-201ENSMUST00000199694 526 ntBASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Vti1a-206ENSMUST00000225529 1244 ntBASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nip7Q9CXK8 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nip7Q9CXK8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nip7Q9CXK8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.73■□□□□ 0.91
Nip7Q9CXK8 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nip7Q9CXK8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nip7Q9CXK8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nip7Q9CXK8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Nip7Q9CXK8 Gm1401-201ENSMUST00000122048 772 ntBASIC20.73■□□□□ 0.91
Nip7Q9CXK8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms