Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ddx47Q9CWX9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Ddx47Q9CWX9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Gm6576-201ENSMUST00000169678 883 ntBASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ddx47Q9CWX9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ddx47Q9CWX9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Mir6349-201ENSMUST00000184059 97 ntBASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ddx47Q9CWX9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.23■□□□□ 0.35
Ddx47Q9CWX9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ddx47Q9CWX9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms