Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rer1Q9CQU3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rer1Q9CQU3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rer1Q9CQU3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rer1Q9CQU3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.69□□□□□ -0.22
Rer1Q9CQU3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rer1Q9CQU3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rer1Q9CQU3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Gm9731-201ENSMUST00000209480 747 ntBASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rer1Q9CQU3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.67□□□□□ -0.22
Rer1Q9CQU3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Gm7638-201ENSMUST00000121348 967 ntBASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Gm38027-201ENSMUST00000192315 235 ntBASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rer1Q9CQU3 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rer1Q9CQU3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rer1Q9CQU3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rer1Q9CQU3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rer1Q9CQU3 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rer1Q9CQU3 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms