Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Gm11336-201ENSMUST00000118168 334 ntBASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Gm45141-201ENSMUST00000206502 1888 ntBASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Sec61bQ9CQS8 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Gm35558-201ENSMUST00000222675 2219 ntBASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Sec61bQ9CQS8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Golph3-205ENSMUST00000228671 2842 ntBASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Sec61bQ9CQS8 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Gm28659-201ENSMUST00000188013 759 ntBASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Gm7461-201ENSMUST00000058918 827 ntBASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Sec61bQ9CQS8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms