Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Lsm7Q9CQQ8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Gm9103-201ENSMUST00000119371 405 ntBASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lsm7Q9CQQ8 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Lsm7Q9CQQ8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lsm7Q9CQQ8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lsm7Q9CQQ8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Gm17807-201ENSMUST00000186869 298 ntBASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lsm7Q9CQQ8 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lsm7Q9CQQ8 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lsm7Q9CQQ8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms