Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Gm44872-201ENSMUST00000207864 420 ntBASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Mir8117-201ENSMUST00000184773 107 ntBASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Gm20949-201ENSMUST00000206478 952 ntBASIC17.02■□□□□ 0.32
Cdh23Q99PF4 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.02■□□□□ 0.32
Cdh23Q99PF4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cdh23Q99PF4 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cdh23Q99PF4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.02■□□□□ 0.31
Cdh23Q99PF4 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.02■□□□□ 0.31
Cdh23Q99PF4 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.02■□□□□ 0.31
Cdh23Q99PF4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Cdh23Q99PF4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdh23Q99PF4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh23Q99PF4 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh23Q99PF4 Gm44430-201ENSMUST00000203376 995 ntBASIC17■□□□□ 0.31
Cdh23Q99PF4 Zfp264-201ENSMUST00000208656 1563 ntBASIC17■□□□□ 0.31
Cdh23Q99PF4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh23Q99PF4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17■□□□□ 0.31
Cdh23Q99PF4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cdh23Q99PF4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh23Q99PF4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh23Q99PF4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh23Q99PF4 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdh23Q99PF4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh23Q99PF4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Gm5745-201ENSMUST00000183748 313 ntBASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh23Q99PF4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms