Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.28■■□□□ 1
Rtn4Q99P72 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
Rtn4Q99P72 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rtn4Q99P72 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4Q99P72 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4Q99P72 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC21.27■■□□□ 1
Rtn4Q99P72 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4Q99P72 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4Q99P72 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4Q99P72 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4Q99P72 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtn4Q99P72 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rtn4Q99P72 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rtn4Q99P72 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rtn4Q99P72 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC21.27■□□□□ 0.99
Rtn4Q99P72 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rtn4Q99P72 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Gm7284-201ENSMUST00000131667 944 ntBASIC21.26■□□□□ 0.99
Rtn4Q99P72 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtn4Q99P72 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Gm25016-201ENSMUST00000158399 131 ntBASIC21.25■□□□□ 0.99
Rtn4Q99P72 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4Q99P72 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rtn4Q99P72 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Il3ra-202ENSMUST00000223589 738 ntBASIC21.24■□□□□ 0.99
Rtn4Q99P72 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rtn4Q99P72 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Gm3272-201ENSMUST00000181181 1229 ntBASIC21.23■□□□□ 0.99
Rtn4Q99P72 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Gm10566-201ENSMUST00000086739 996 ntBASIC21.23■□□□□ 0.99
Rtn4Q99P72 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rtn4Q99P72 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms