Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.3■□□□□ 0.2
Msh4Q99MT2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.3■□□□□ 0.2
Msh4Q99MT2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh4Q99MT2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.29■□□□□ 0.2
Msh4Q99MT2 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Gm7791-201ENSMUST00000219066 539 ntBASIC16.29■□□□□ 0.2
Msh4Q99MT2 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Msh4Q99MT2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.28■□□□□ 0.2
Msh4Q99MT2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Gm7977-201ENSMUST00000193787 748 ntBASIC16.28■□□□□ 0.2
Msh4Q99MT2 Gm18959-201ENSMUST00000208954 655 ntBASIC16.28■□□□□ 0.2
Msh4Q99MT2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Msh4Q99MT2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Gm9731-201ENSMUST00000209480 747 ntBASIC16.27■□□□□ 0.2
Msh4Q99MT2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Msh4Q99MT2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.27■□□□□ 0.19
Msh4Q99MT2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.27■□□□□ 0.19
Msh4Q99MT2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Msh4Q99MT2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.26■□□□□ 0.19
Msh4Q99MT2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Msh4Q99MT2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.26■□□□□ 0.19
Msh4Q99MT2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms