Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Gm13216-201ENSMUST00000117145 591 ntBASIC17.94■□□□□ 0.46
Tlr3Q99MB1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tlr3Q99MB1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Tlr3Q99MB1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Tlr3Q99MB1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 AA414768-201ENSMUST00000121924 1257 ntBASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Gm45058-201ENSMUST00000205810 766 ntBASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Tlr3Q99MB1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Tlr3Q99MB1 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms