Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Gm43575-201ENSMUST00000196420 516 ntBASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Nkx6-1Q99MA9 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Gm15467-201ENSMUST00000120582 445 ntBASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Grk6-206ENSMUST00000224995 2971 ntBASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Nkx6-1Q99MA9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Mir5126-201ENSMUST00000175513 77 ntBASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Nkx6-1Q99MA9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Gm35558-201ENSMUST00000222675 2219 ntBASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Nkx6-1Q99MA9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Nkx6-1Q99MA9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms