Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.63■□□□□ 0.41
Clp1Q99LI9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.63■□□□□ 0.41
Clp1Q99LI9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Clp1Q99LI9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Gm11779-201ENSMUST00000118541 368 ntBASIC17.62■□□□□ 0.41
Clp1Q99LI9 Gm11594-201ENSMUST00000122313 162 ntBASIC17.62■□□□□ 0.41
Clp1Q99LI9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clp1Q99LI9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Clp1Q99LI9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.61■□□□□ 0.41
Clp1Q99LI9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.61■□□□□ 0.41
Clp1Q99LI9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Clp1Q99LI9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.6■□□□□ 0.41
Clp1Q99LI9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Gm7230-201ENSMUST00000173026 815 ntBASIC17.6■□□□□ 0.41
Clp1Q99LI9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.6■□□□□ 0.41
Clp1Q99LI9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.6■□□□□ 0.41
Clp1Q99LI9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Clp1Q99LI9 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Clp1Q99LI9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Clp1Q99LI9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.59■□□□□ 0.41
Clp1Q99LI9 Gm5264-201ENSMUST00000190584 848 ntBASIC17.59■□□□□ 0.41
Clp1Q99LI9 Gm2213-201ENSMUST00000197485 688 ntBASIC17.59■□□□□ 0.41
Clp1Q99LI9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms