Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cdk9Q99J95 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cdk9Q99J95 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.87■□□□□ 0.29
Cdk9Q99J95 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.87■□□□□ 0.29
Cdk9Q99J95 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cdk9Q99J95 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.86■□□□□ 0.29
Cdk9Q99J95 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cdk9Q99J95 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.85■□□□□ 0.29
Cdk9Q99J95 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.85■□□□□ 0.29
Cdk9Q99J95 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.85■□□□□ 0.29
Cdk9Q99J95 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cdk9Q99J95 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.84■□□□□ 0.29
Cdk9Q99J95 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Cdk9Q99J95 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms