Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdha11Q91Y19 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Gm18115-201ENSMUST00000221209 621 ntBASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdha11Q91Y19 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha11Q91Y19 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha11Q91Y19 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Pcdha11Q91Y19 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Pcdha11Q91Y19 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha11Q91Y19 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha11Q91Y19 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdha11Q91Y19 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Gm29518-201ENSMUST00000190858 372 ntBASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Gm17808-201ENSMUST00000200859 894 ntBASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Gm7367-201ENSMUST00000057611 492 ntBASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdha11Q91Y19 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Mir770-201ENSMUST00000103252 94 ntBASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Gm6623-201ENSMUST00000173570 544 ntBASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdha11Q91Y19 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdha11Q91Y19 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdha11Q91Y19 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms