Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Gm7370-201ENSMUST00000219471 767 ntBASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.47■□□□□ 0.39
Pcdha3Q91Y16 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Gm7977-201ENSMUST00000193787 748 ntBASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Gm18032-201ENSMUST00000222541 538 ntBASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdha3Q91Y16 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdha3Q91Y16 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdha3Q91Y16 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Mir1668-201ENSMUST00000184114 107 ntBASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
Pcdha3Q91Y16 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Gm22697-201ENSMUST00000175194 63 ntBASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdha3Q91Y16 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdha3Q91Y16 Gm27000-201ENSMUST00000182943 842 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms