Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Gm13216-201ENSMUST00000117145 591 ntBASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Gm11355-201ENSMUST00000121120 306 ntBASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdha9Q91Y11 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdha9Q91Y11 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha9Q91Y11 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha9Q91Y11 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Pcdha9Q91Y11 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdha9Q91Y11 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdha9Q91Y11 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha9Q91Y11 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha9Q91Y11 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdha9Q91Y11 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdha9Q91Y11 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdha9Q91Y11 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdha9Q91Y11 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms