Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdhb1Q91Y08 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb1Q91Y08 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb1Q91Y08 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Actl10-202ENSMUST00000226583 1501 ntBASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb1Q91Y08 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb1Q91Y08 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb1Q91Y08 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms