Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb18Q91Y02 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb18Q91Y02 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb18Q91Y02 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb18Q91Y02 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb18Q91Y02 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb18Q91Y02 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb18Q91Y02 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb18Q91Y02 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb18Q91Y02 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb18Q91Y02 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Gm13186-201ENSMUST00000118031 316 ntBASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Gm44771-201ENSMUST00000206975 626 ntBASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb18Q91Y02 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Gm34391-201ENSMUST00000203706 907 ntBASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Birc2-201ENSMUST00000054878 378 ntBASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb18Q91Y02 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Mzt1-203ENSMUST00000227948 952 ntBASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb18Q91Y02 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Phf7-203ENSMUST00000226565 1971 ntBASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb18Q91Y02 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms