Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Gm9013-201ENSMUST00000132939 882 ntBASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb2Q91Y00 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb2Q91Y00 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb2Q91Y00 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhb2Q91Y00 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhb2Q91Y00 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Pcdhb2Q91Y00 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdhb2Q91Y00 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdhb2Q91Y00 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms