Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdhb20Q91XZ9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Gm25509-201ENSMUST00000116985 106 ntBASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Gm6345-202ENSMUST00000180900 204 ntBASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Gm18719-201ENSMUST00000196696 1413 ntBASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhb20Q91XZ9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhb20Q91XZ9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhb20Q91XZ9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Gm29013-201ENSMUST00000187431 237 ntBASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Gm45359-201ENSMUST00000210635 427 ntBASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb20Q91XZ9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb20Q91XZ9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms