Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdhga11Q91XY8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga11Q91XY8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga11Q91XY8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdhga11Q91XY8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Gm7638-201ENSMUST00000121348 967 ntBASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Il3ra-202ENSMUST00000223589 738 ntBASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdhga11Q91XY8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Timm23-208ENSMUST00000226683 750 ntBASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhga11Q91XY8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhga11Q91XY8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Gm37055-201ENSMUST00000191866 133 ntBASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhga11Q91XY8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms