Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhga9Q91XX9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhga9Q91XX9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Gm33142-201ENSMUST00000193913 867 ntBASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhga9Q91XX9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhga9Q91XX9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga9Q91XX9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga9Q91XX9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga9Q91XX9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga9Q91XX9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga9Q91XX9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdhga9Q91XX9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhga9Q91XX9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Gm7213-201ENSMUST00000215977 950 ntBASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhga9Q91XX9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms