Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Gm9013-201ENSMUST00000132939 882 ntBASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx41Q91VN6 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Gm10566-201ENSMUST00000086739 996 ntBASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx41Q91VN6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Ank2-226ENSMUST00000189368 339 ntBASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.14■□□□□ 0.65
Ddx41Q91VN6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Gm14859-201ENSMUST00000117752 357 ntBASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx41Q91VN6 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Gm26039-201ENSMUST00000158152 144 ntBASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx41Q91VN6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx41Q91VN6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms