Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Gm18115-201ENSMUST00000221209 621 ntBASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb17Q91VD8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Gm25509-201ENSMUST00000116985 106 ntBASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Gm6659-201ENSMUST00000174752 547 ntBASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Gm43037-201ENSMUST00000196808 250 ntBASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Phf7-203ENSMUST00000226565 1971 ntBASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb17Q91VD8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb17Q91VD8 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb17Q91VD8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb17Q91VD8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdhb17Q91VD8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb17Q91VD8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb17Q91VD8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Gm18377-201ENSMUST00000215141 607 ntBASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb17Q91VD8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb17Q91VD8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdhb17Q91VD8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms