Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.51■□□□□ 0.23
Vsx1Q91V10 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vsx1Q91V10 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.5■□□□□ 0.23
Vsx1Q91V10 Gm11336-201ENSMUST00000118168 334 ntBASIC16.5■□□□□ 0.23
Vsx1Q91V10 Gm7862-201ENSMUST00000121461 292 ntBASIC16.5■□□□□ 0.23
Vsx1Q91V10 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.5■□□□□ 0.23
Vsx1Q91V10 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vsx1Q91V10 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Gm6376-201ENSMUST00000209407 580 ntBASIC16.49■□□□□ 0.23
Vsx1Q91V10 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.49■□□□□ 0.23
Vsx1Q91V10 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vsx1Q91V10 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Gm2213-201ENSMUST00000197485 688 ntBASIC16.48■□□□□ 0.23
Vsx1Q91V10 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.48■□□□□ 0.23
Vsx1Q91V10 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.48■□□□□ 0.23
Vsx1Q91V10 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Vsx1Q91V10 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vsx1Q91V10 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Vsx1Q91V10 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms