Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Pcdh18Q8VHR0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Pcdh18Q8VHR0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Pcdh18Q8VHR0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Pcdh18Q8VHR0 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Mir2861-201ENSMUST00000175539 82 ntBASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdh18Q8VHR0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.12■□□□□ 0.17
Pcdh18Q8VHR0 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms