Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Gm11927-201ENSMUST00000118472 759 ntBASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpa1Q8VEE4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Gm6211-202ENSMUST00000167849 925 ntBASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpa1Q8VEE4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpa1Q8VEE4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa1Q8VEE4 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms