Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ndc1Q8VCB1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Gm17808-201ENSMUST00000200859 894 ntBASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ndc1Q8VCB1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ndc1Q8VCB1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Gm27704-201ENSMUST00000185094 107 ntBASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Ank2-226ENSMUST00000189368 339 ntBASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ndc1Q8VCB1 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ndc1Q8VCB1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ndc1Q8VCB1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ndc1Q8VCB1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ndc1Q8VCB1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ndc1Q8VCB1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Ndc1Q8VCB1 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ndc1Q8VCB1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ndc1Q8VCB1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ndc1Q8VCB1 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Gm37722-201ENSMUST00000193757 208 ntBASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ndc1Q8VCB1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms