Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Gm18032-201ENSMUST00000222541 538 ntBASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.35■□□□□ 0.53
Rpap2Q8VC34 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Gm22697-201ENSMUST00000175194 63 ntBASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Gm10231-201ENSMUST00000181584 441 ntBASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Gm27389-201ENSMUST00000183622 195 ntBASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Gm44450-201ENSMUST00000199528 114 ntBASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Gm10175-202ENSMUST00000208752 441 ntBASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Rpap2Q8VC34 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpap2Q8VC34 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rpap2Q8VC34 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpap2Q8VC34 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpap2Q8VC34 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpap2Q8VC34 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpap2Q8VC34 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rpap2Q8VC34 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Gm21559-201ENSMUST00000220638 855 ntBASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Gm8587-201ENSMUST00000076538 843 ntBASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rpap2Q8VC34 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Gm11336-201ENSMUST00000118168 334 ntBASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rpap2Q8VC34 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rpap2Q8VC34 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms