Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Gm5587-201ENSMUST00000206270 674 ntBASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sh3kbp1Q8R550 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sh3kbp1Q8R550 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3kbp1Q8R550 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3kbp1Q8R550 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms