Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Slf1Q8R3P9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Gm44549-201ENSMUST00000208351 577 ntBASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Slf1Q8R3P9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Gm2399-201ENSMUST00000104944 225 ntBASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Slf1Q8R3P9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Slf1Q8R3P9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Slf1Q8R3P9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Slf1Q8R3P9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms