Protein–RNA interactions for Protein: Q8R1U2

Cgref1, Cell growth regulator with EF hand domain protein 1, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgref1Q8R1U2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cgref1Q8R1U2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cgref1Q8R1U2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cgref1Q8R1U2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cgref1Q8R1U2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cgref1Q8R1U2 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cgref1Q8R1U2 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms