Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tm6sf2Q8R1J1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tm6sf2Q8R1J1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tm6sf2Q8R1J1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.71■□□□□ 0.1
Tm6sf2Q8R1J1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tm6sf2Q8R1J1 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tm6sf2Q8R1J1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Gm11336-201ENSMUST00000118168 334 ntBASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tm6sf2Q8R1J1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tm6sf2Q8R1J1 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tm6sf2Q8R1J1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tm6sf2Q8R1J1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.68■□□□□ 0.1
Tm6sf2Q8R1J1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms