Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cnot6Q8K3P5 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Gm15378-201ENSMUST00000121894 207 ntBASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cnot6Q8K3P5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cnot6Q8K3P5 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Gm43183-201ENSMUST00000200632 547 ntBASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.4■□□□□ 0.22
Cnot6Q8K3P5 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cnot6Q8K3P5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cnot6Q8K3P5 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cnot6Q8K3P5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cnot6Q8K3P5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms