Protein–RNA interactions for Protein: Q8K3G5

Vrk3, Inactive serine/threonine-protein kinase VRK3, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk3Q8K3G5 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vrk3Q8K3G5 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Mir1199-201ENSMUST00000117015 119 ntBASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.18□□□□□ -0.14
Vrk3Q8K3G5 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vrk3Q8K3G5 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vrk3Q8K3G5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms