Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Gm3375-201ENSMUST00000203929 796 ntBASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cchcr1Q8K2I2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cchcr1Q8K2I2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
Cchcr1Q8K2I2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cchcr1Q8K2I2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cchcr1Q8K2I2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Gm21814-202ENSMUST00000203277 873 ntBASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cchcr1Q8K2I2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cchcr1Q8K2I2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms