Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim68Q8K243 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim68Q8K243 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim68Q8K243 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim68Q8K243 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim68Q8K243 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trim68Q8K243 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trim68Q8K243 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Trim68Q8K243 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trim68Q8K243 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.12■□□□□ 0.49
Trim68Q8K243 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC18.12■□□□□ 0.49
Trim68Q8K243 Olfr129-201ENSMUST00000122318 993 ntBASIC18.12■□□□□ 0.49
Trim68Q8K243 Gm29791-202ENSMUST00000207888 369 ntBASIC18.12■□□□□ 0.49
Trim68Q8K243 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim68Q8K243 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trim68Q8K243 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trim68Q8K243 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trim68Q8K243 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim68Q8K243 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim68Q8K243 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim68Q8K243 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim68Q8K243 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trim68Q8K243 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim68Q8K243 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
Trim68Q8K243 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.11■□□□□ 0.49
Trim68Q8K243 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Trim68Q8K243 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim68Q8K243 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.11■□□□□ 0.49
Trim68Q8K243 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim68Q8K243 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trim68Q8K243 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trim68Q8K243 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trim68Q8K243 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim68Q8K243 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trim68Q8K243 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.1■□□□□ 0.49
Trim68Q8K243 Gm45328-201ENSMUST00000210942 917 ntBASIC18.1■□□□□ 0.49
Trim68Q8K243 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.1■□□□□ 0.49
Trim68Q8K243 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Birc2-201ENSMUST00000054878 378 ntBASIC18.1■□□□□ 0.49
Trim68Q8K243 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
Trim68Q8K243 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.1■□□□□ 0.49
Trim68Q8K243 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trim68Q8K243 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Trim68Q8K243 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.09■□□□□ 0.49
Trim68Q8K243 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trim68Q8K243 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trim68Q8K243 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Trim68Q8K243 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trim68Q8K243 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.09■□□□□ 0.49
Trim68Q8K243 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim68Q8K243 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim68Q8K243 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim68Q8K243 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim68Q8K243 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms