Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm18959-201ENSMUST00000208954 655 ntBASIC15.74■□□□□ 0.11
Rfwd3Q8CIK8 Gm7370-201ENSMUST00000219471 767 ntBASIC15.74■□□□□ 0.11
Rfwd3Q8CIK8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rfwd3Q8CIK8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rfwd3Q8CIK8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Rfwd3Q8CIK8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfwd3Q8CIK8 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfwd3Q8CIK8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rfwd3Q8CIK8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rfwd3Q8CIK8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rfwd3Q8CIK8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Gm18958-201ENSMUST00000174258 762 ntBASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Mir5130-201ENSMUST00000175160 84 ntBASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Gm27000-201ENSMUST00000182943 842 ntBASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rfwd3Q8CIK8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfwd3Q8CIK8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfwd3Q8CIK8 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfwd3Q8CIK8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rfwd3Q8CIK8 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rfwd3Q8CIK8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms