Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Syne4Q8CII8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Gm13418-201ENSMUST00000119097 944 ntBASIC18.9■□□□□ 0.62
Syne4Q8CII8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC18.9■□□□□ 0.62
Syne4Q8CII8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.9■□□□□ 0.62
Syne4Q8CII8 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Syne4Q8CII8 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Syne4Q8CII8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Syne4Q8CII8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Syne4Q8CII8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Gm6736-201ENSMUST00000166583 948 ntBASIC18.89■□□□□ 0.61
Syne4Q8CII8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Gm7506-201ENSMUST00000207758 815 ntBASIC18.89■□□□□ 0.61
Syne4Q8CII8 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.89■□□□□ 0.61
Syne4Q8CII8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Syne4Q8CII8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Gm25990-201ENSMUST00000102440 86 ntBASIC18.88■□□□□ 0.61
Syne4Q8CII8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Gm15173-201ENSMUST00000122049 433 ntBASIC18.88■□□□□ 0.61
Syne4Q8CII8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC18.88■□□□□ 0.61
Syne4Q8CII8 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.88■□□□□ 0.61
Syne4Q8CII8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.88■□□□□ 0.61
Syne4Q8CII8 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Syne4Q8CII8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Gm7230-201ENSMUST00000173026 815 ntBASIC18.87■□□□□ 0.61
Syne4Q8CII8 Gm4535-201ENSMUST00000182274 558 ntBASIC18.87■□□□□ 0.61
Syne4Q8CII8 Gm43575-201ENSMUST00000196420 516 ntBASIC18.87■□□□□ 0.61
Syne4Q8CII8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Gm10355-201ENSMUST00000097146 517 ntBASIC18.87■□□□□ 0.61
Syne4Q8CII8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Syne4Q8CII8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Syne4Q8CII8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Syne4Q8CII8 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms