Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rftn2Q8CHX7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rftn2Q8CHX7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Gm10052-201ENSMUST00000168019 960 ntBASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Gm7729-201ENSMUST00000050143 801 ntBASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Rftn2Q8CHX7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Gm17971-201ENSMUST00000190239 806 ntBASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Rftn2Q8CHX7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Gm44430-201ENSMUST00000203376 995 ntBASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Rftn2Q8CHX7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Rftn2Q8CHX7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rftn2Q8CHX7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms