Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rdh1Q8CGV4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Gm17971-201ENSMUST00000190239 806 ntBASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rdh1Q8CGV4 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Gm27741-201ENSMUST00000185060 237 ntBASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rdh1Q8CGV4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rdh1Q8CGV4 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rdh1Q8CGV4 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rdh1Q8CGV4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Rdh1Q8CGV4 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms