Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.33■□□□□ 0.36
Rp1l1Q8CGM2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rp1l1Q8CGM2 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rp1l1Q8CGM2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Gm7222-201ENSMUST00000117512 906 ntBASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Gm9172-201ENSMUST00000212092 954 ntBASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rp1l1Q8CGM2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Mir8117-201ENSMUST00000184773 107 ntBASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rp1l1Q8CGM2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rp1l1Q8CGM2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Gm11764-201ENSMUST00000120221 623 ntBASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Gm27321-201ENSMUST00000185021 205 ntBASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Gm27646-201ENSMUST00000183989 110 ntBASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rp1l1Q8CGM2 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rp1l1Q8CGM2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 Gm14701-201ENSMUST00000117156 348 ntBASIC17.27■□□□□ 0.36
Rp1l1Q8CGM2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms