Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.71■□□□□ 0.91
Smc5Q8CG46 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Smc5Q8CG46 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc5Q8CG46 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc5Q8CG46 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc5Q8CG46 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.7■□□□□ 0.9
Smc5Q8CG46 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.7■□□□□ 0.9
Smc5Q8CG46 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smc5Q8CG46 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc5Q8CG46 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smc5Q8CG46 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Smc5Q8CG46 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.69■□□□□ 0.9
Smc5Q8CG46 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
Smc5Q8CG46 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Gm7791-201ENSMUST00000219066 539 ntBASIC20.68■□□□□ 0.9
Smc5Q8CG46 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smc5Q8CG46 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.67■□□□□ 0.9
Smc5Q8CG46 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.67■□□□□ 0.9
Smc5Q8CG46 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smc5Q8CG46 AC093043.3-201ENSMUST00000226531 2273 ntBASIC20.66■□□□□ 0.9
Smc5Q8CG46 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smc5Q8CG46 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.65■□□□□ 0.9
Smc5Q8CG46 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.65■□□□□ 0.9
Smc5Q8CG46 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.65■□□□□ 0.9
Smc5Q8CG46 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smc5Q8CG46 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms