Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdhb7Q8CDY9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pcdhb7Q8CDY9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Pcdhb7Q8CDY9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Gm42790-201ENSMUST00000201268 969 ntBASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Odf3b-204ENSMUST00000227834 930 ntBASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhb7Q8CDY9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb7Q8CDY9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb7Q8CDY9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb7Q8CDY9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb7Q8CDY9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb7Q8CDY9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhb7Q8CDY9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhb7Q8CDY9 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms