Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Prpf31Q8CCF0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 Gm44450-201ENSMUST00000199528 114 ntBASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Prpf31Q8CCF0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Prpf31Q8CCF0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Gm45328-201ENSMUST00000210942 917 ntBASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Prpf31Q8CCF0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf31Q8CCF0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Prpf31Q8CCF0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.27■□□□□ 0.51
Prpf31Q8CCF0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Prpf31Q8CCF0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Prpf31Q8CCF0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Prpf31Q8CCF0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Gm27742-201ENSMUST00000184667 60 ntBASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.24■□□□□ 0.51
Prpf31Q8CCF0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms