Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.19■□□□□ 0.18
SynpoQ8CC35 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SynpoQ8CC35 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Gm24841-201ENSMUST00000158676 357 ntBASIC16.18■□□□□ 0.18
SynpoQ8CC35 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SynpoQ8CC35 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Gm23634-201ENSMUST00000175071 91 ntBASIC16.17■□□□□ 0.18
SynpoQ8CC35 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Gm18032-201ENSMUST00000222541 538 ntBASIC16.17■□□□□ 0.18
SynpoQ8CC35 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.17■□□□□ 0.18
SynpoQ8CC35 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SynpoQ8CC35 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Gm18101-201ENSMUST00000215769 548 ntBASIC16.16■□□□□ 0.18
SynpoQ8CC35 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.16■□□□□ 0.18
SynpoQ8CC35 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SynpoQ8CC35 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.15■□□□□ 0.18
SynpoQ8CC35 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SynpoQ8CC35 Gm7638-201ENSMUST00000121348 967 ntBASIC16.15■□□□□ 0.18
SynpoQ8CC35 Gm16061-201ENSMUST00000122167 857 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms